Package: varian 0.3.0

varian: Variability Analysis in R

Uses a Bayesian model to estimate the variability in a repeated measure outcome and use that as an outcome or a predictor in a second stage model.

Authors:Joshua F. Wiley [aut, cre]

varian_0.3.0.tar.gz

varian_0.3.0.tar.gz(r-4.4-noble)
varian_0.3.0.tgz(r-4.4-emscripten)varian_0.3.0.tgz(r-4.3-emscripten)
varian.pdf |varian.html✨
varian/json (API)

# Install 'varian' in R:

install.packages('varian', repos = c('https://jwiley.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/jwiley/varian/issues

On CRAN:

4.53 score 7 stars 2 packages 16 scripts 279 downloads 1 mentions 10 exports 161 dependencies

Last updated 2 years agofrom:81df622830. Checks:OK: 1. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 06 2024

Exports:res_gamma rmssd rmssd_id rolling_diff rolling_diff_id sd_id simulate_gvm varian vm_diagnostics vmp_plot

Dependencies:abind backports base64enc BH bit bit64 boot broom bslib cachem callr car carData checkmate cli clipr cluster codetools colorspace corrplot cowplot cpp11 crayon data.table DEoptimR Deriv desc digest distributional doBy dplyr emmeans estimability evaluate extraoperators fansi farver fastmap fontawesome forcats foreach foreign Formula fs fst fstcore generics ggplot2 ggpubr ggrepel ggsci ggsignif glmnet glue GPArotation gridExtra gtable haven highr Hmisc hms htmlTable htmltools htmlwidgets inline isoband iterators jomo jquerylib jsonlite JWileymisc knitr labeling lattice lavaan lifecycle lme4 loo magrittr MASS Matrix MatrixModels matrixStats memoise mgcv mice microbenchmark mime minqa mitml mnormt modelr multcomp multcompView munsell mvtnorm nlme nloptr nnet numDeriv ordinal pan pbivnorm pbkrtest pillar pkgbuild pkgconfig polspline polynom posterior prettyunits processx progress ps psych purrr quadprog quantreg QuickJSR R6 rappdirs RColorBrewer Rcpp RcppEigen RcppParallel readr rlang rmarkdown rms robustbase rpart rstan rstatix rstudioapi sandwich sass scales shape SparseM StanHeaders stringi stringr survival tensorA TH.data tibble tidyr tidyselect tinytex tzdb ucminf utf8 vctrs VGAM viridis viridisLite vroom withr xfun yaml zoo

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Estimate the parameters for a Gamma distribution	gamma_params
Estimates the parameters of a Gamma distribution from SDs	res_gamma
Simulate a Gamma Variability Model	simulate_gvm
Calculate Initial Values for Stan VM Model	stan_inits
Summary method for variability model objects	summary.vm
Variability Measures	by_id rmssd rmssd_id rmssid_id rolling_diff rolling_diff_id sd_id Variability_Measures
Variablity Analysis using a Bayesian Variability Model (VM)	varian
Plot diagnostics from a VM model	vm_diagnostics
Create a Stan class VM object	vm_stan
Plot the posterior distributions of the focal parameters from a VM model	vmp_plot

Usage by other packages (reverse dependencies)