JWileymisc - Miscellaneous Utilities and Functions

Miscellaneous tools and functions, including: generate descriptive statistics tables, format output, visualize relations among variables or check distributions, and generic functions for residual and model diagnostics.

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8.01 score 8 stars 4 dependents 331 scripts 1.1k downloads

brmsmargins - Bayesian Marginal Effects for 'brms' Models

Calculate Bayesian marginal effects, average marginal effects, and marginal coefficients (also called population averaged coefficients) for models fit using the 'brms' package including fixed effects, mixed effects, and location scale models. These are based on marginal predictions that integrate out random effects if necessary (see for example <doi:10.1186/s12874-015-0046-6> and <doi:10.1111/biom.12707>).

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openblascppopenmp

7.59 score 19 stars 47 scripts 4.8k downloads

extraoperators - Extra Binary Relational and Logical Operators

Speed up common tasks, particularly logical or relational comparisons and routine follow up tasks such as finding the indices and subsetting. Inspired by mathematics, where something like: 3 < x < 6 is a standard, elegant and clear way to assert that x is both greater than 3 and less than 6 (see for example <https://en.wikipedia.org/wiki/Relational_operator>), a chaining operator is implemented. The chaining operator, %c%, allows multiple relational operations to be used in quotes on the right hand side for the same object, on the left hand side. The %e% operator allows something like set-builder notation (see for example <https://en.wikipedia.org/wiki/Set-builder_notation>) to be used on the right hand side. Operators have built in prefixes defined for all, any, subset, and which to reduce the amount of code needed for common tasks, such as return those values that are true.

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7.53 score 3 stars 7 dependents 254 scripts 4.2k downloads

multilevelTools - Multilevel and Mixed Effects Model Diagnostics and Effect Sizes

Effect sizes, diagnostics and performance metrics for multilevel and mixed effects models. Includes marginal and conditional 'R2' estimates for linear mixed effects models based on Johnson (2014) <doi:10.1111/2041-210X.12225>.

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5.85 score 5 stars 141 scripts 962 downloads

pscore - Standardizing Physiological Composite Risk Endpoints

Provides a number of functions to simplify and automate the scoring, comparison, and evaluation of different ways of creating composites of data. It is particularly aimed at facilitating the creation of physiological composites of metabolic syndrome symptom score (MetSSS) and allostatic load (AL). Provides a wrapper to calculate the MetSSS on new data using the Healthy Hearts formula.

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4.41 score 1 stars 13 scripts 176 downloads

varian - Variability Analysis in R

Uses a Bayesian model to estimate the variability in a repeated measure outcome and use that as an outcome or a predictor in a second stage model.

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4.25 score 7 stars 1 dependents 17 scripts 229 downloads